PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LM8

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	100.0	H1	13	H1-13-1	6	KASGYTFTSYYMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	90.0	H2	10	H2-10-1	10	IINSSGGSTS	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	100.0	H3	22	H3-22-*	-1	ARpprnyydrSGYYQRAEYFQH
H	heavy	Homo.sapiens	Hu_IGHV1-46*01	100.0	Hu_IGHV1-46*01	100.0	H4	8	H4-8-1	7	RDTSTSTV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L1	11	L1-11-1	5	QASQDISNYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	4	YDASNLET	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	85.7	L3	9	L3-9-cis7-1	10	QQYDNPpLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	97.1	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	92.3	H1	13	H1-13-1	14	QGSGYSFTSYWIG	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	90.0	H2	10	H2-10-*	-1	IIYPGESDTR	BBBBLALBBB
M	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	100.0	H3	16	H3-16-*	-1	ARIRGVYSSGWIggDY
M	heavy	Homo.sapiens	Hu_IGHV5-51*01	97.3	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	8	ADKSISTA	BBAAALBB
N	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	5	RASQSISSYLN	BBABBAEABBB
N	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L2	8	L2-8-1	5	YAASSLQS	BLLABBBB
N	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L3	11	L3-11-*	-1	QQSYStprQWT	BBAABBAAABB
N	kappa	Homo.sapiens	Hu_IGKV1-39*01	100.0	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022