PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LKI

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
AAA	heavy	Mus.musculus	Mo_IGHV6-6*01	100.0	Mo_IGHV6-6*01	92.3	H1	13	H1-13-1	12	AASGFTFSDAYMD	BBBLBBAAABBBB
AAA	heavy	Mus.musculus	Mo_IGHV6-6*01	100.0	Mo_IGHV6-6*01	91.7	H2	12	H2-12-1	9	EIRNKanNHATF	BBBBAAALLBBB
AAA	heavy	Mus.musculus	Mo_IGHV6-6*01	100.0	Mo_IGHV6-6*01	50.0	H3	8	H3-8-*	-1	TLQYGTSS	BBABLBBB
AAA	heavy	Mus.musculus	Mo_IGHV6-6*01	100.0	Mo_IGHV6-6*01	100.0	H4	8	H4-8-1	5	RDDSKSSV	BBAAALBB
BBB	kappa	Mus.musculus	Mo_IGKV1-133*01	97.1	Mo_IGKV1-133*01	93.8	L1	16	L1-16-1	8	KSSQSLlysngKTFLN	BBABBABBAALBBBBB
BBB	kappa	Mus.musculus	Mo_IGKV1-133*01	97.1	Mo_IGKV1-133*01	100.0	L2	8	L2-8-1	5	YLVSKLDS	BLLABBBB
BBB	kappa	Mus.musculus	Mo_IGKV1-133*01	97.1	Mo_IGKV1-133*01	100.0	L3	9	L3-9-cis7-*	-1	VQGTHFPLT	BBAABBbBB
BBB	kappa	Mus.musculus	Mo_IGKV1-133*01	97.1	Mo_IGKV1-133*01	83.3	L4	6	L4-6-1	5	GSGTAF	EBEABB
DDD	heavy	Mus.musculus	Mo_IGHV6-6*01	100.0	Mo_IGHV6-6*01	92.3	H1	13	H1-13-1	11	AASGFTFSDAYMD	BBBLBBAAABBBB
DDD	heavy	Mus.musculus	Mo_IGHV6-6*01	100.0	Mo_IGHV6-6*01	91.7	H2	12	H2-12-1	9	EIRNKanNHATF	BBBBAAALLBBB
DDD	heavy	Mus.musculus	Mo_IGHV6-6*01	100.0	Mo_IGHV6-6*01	50.0	H3	8	H3-8-*	-1	TLQYGTSS	BBABLBBB
DDD	heavy	Mus.musculus	Mo_IGHV6-6*01	100.0	Mo_IGHV6-6*01	100.0	H4	8	H4-8-1	5	RDDSKSSV	BBAAALBB
EEE	kappa	Mus.musculus	Mo_IGKV1-133*01	97.1	Mo_IGKV1-133*01	93.8	L1	16	L1-16-1	7	KSSQSLlysngKTFLN	BBABBABBAALBBBBB
EEE	kappa	Mus.musculus	Mo_IGKV1-133*01	97.1	Mo_IGKV1-133*01	100.0	L2	8	L2-8-1	5	YLVSKLDS	BLLABBBB
EEE	kappa	Mus.musculus	Mo_IGKV1-133*01	97.1	Mo_IGKV1-133*01	100.0	L3	9	L3-9-cis7-*	-1	VQGTHFPLT	BBAABBbBB
EEE	kappa	Mus.musculus	Mo_IGKV1-133*01	97.1	Mo_IGKV1-133*01	83.3	L4	6	L4-6-1	5	GSGTAF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022