PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LF2

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Mo_IGHV1-19*01	100.0	H1	13	H1-13-*	-1	KASGYTFTDYYMN	BBBLBBBLABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Mo_IGHV1-19*01	80.0	H2	10	H2-10-*	-1	VISPYNGGTT	BBBAABBBAL
D	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	0.0	H3	9	H3-9-*	-1	VYDLYYFDY	BBLAABBAB
D	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	87.5	H4	8	H4-8-*	-1	VDKSTSTA	BBAABABB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Mo_IGKV5-43*01	81.8	L1	11	L1-11-2	25	RASQRISNDLH	BBABBALLABB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Mo_IGKV5-43*01	100.0	L2	8	L2-8-*	-1	KYASQSIS	ABLBLLBL
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	57.1	L3	9	L3-9-cis7-*	-1	QQSNSWPRT	BBABBBbLB
E	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BLaABB
F	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Mo_IGHV1-19*01	100.0	H1	13	H1-13-*	-1	KASGYTFTDYYMN	BBBLBBBLABBBB
F	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Mo_IGHV1-19*01	80.0	H2	10	H2-10-*	-1	VISPYNGGTT	BBBAABBBAL
F	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	0.0	H3	9	H3-9-*	-1	VYDLYYFDY	BBLAABBAB
F	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	87.5	H4	8	H4-8-*	-1	VDKSTSTA	BBAABABB
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Mo_IGHV1-19*01	100.0	H1	13	H1-13-*	-1	KASGYTFTDYYMN	BBBLBBBLABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Mo_IGHV1-19*01	80.0	H2	10	H2-10-*	-1	VISPYNGGTT	BBBAABBBAL
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	0.0	H3	9	H3-9-*	-1	VYDLYYFDY	BBLAABBAB
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	87.5	H4	8	H4-8-*	-1	VDKSTSTA	BBAABABB
H	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Mo_IGKV5-43*01	81.8	L1	11	L1-11-2	25	RASQRISNDLH	BBABBALLABB
H	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Mo_IGKV5-43*01	100.0	L2	8	L2-8-*	-1	KYASQSIS	ABLBLLBL
H	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	57.1	L3	9	L3-9-cis7-*	-1	QQSNSWPRT	BBABBBbLB
H	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BLaABB
I	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Mo_IGKV5-43*01	81.8	L1	11	L1-11-2	25	RASQRISNDLH	BBABBALLABB
I	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Mo_IGKV5-43*01	100.0	L2	8	L2-8-*	-1	KYASQSIS	ABLBLLBL
I	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	57.1	L3	9	L3-9-cis7-*	-1	QQSNSWPRT	BBABBBbLB
I	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BLaABB
K	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Mo_IGHV1-19*01	100.0	H1	13	H1-13-*	-1	KASGYTFTDYYMN	BBBLBBBLABBBB
K	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Mo_IGHV1-19*01	80.0	H2	10	H2-10-*	-1	VISPYNGGTT	BBBAABBBAL
K	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	0.0	H3	9	H3-9-*	-1	VYDLYYFDY	BBLAABBAB
K	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	87.5	H4	8	H4-8-*	-1	VDKSTSTA	BBAABABB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Mo_IGKV5-43*01	81.8	L1	11	L1-11-2	25	RASQRISNDLH	BBABBALLABB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Mo_IGKV5-43*01	100.0	L2	8	L2-8-*	-1	KYASQSIS	ABLBLLBL
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	57.1	L3	9	L3-9-cis7-*	-1	QQSNSWPRT	BBABBBbLB
L	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BLaABB
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Mo_IGKV5-43*01	81.8	L1	11	L1-11-2	25	RASQRISNDLH	BBABBALLABB
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Mo_IGKV5-43*01	100.0	L2	8	L2-8-*	-1	KYASQSIS	ABLBLLBL
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	57.1	L3	9	L3-9-cis7-*	-1	QQSNSWPRT	BBABBBbLB
M	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BLaABB
N	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Mo_IGKV5-43*01	81.8	L1	11	L1-11-2	25	RASQRISNDLH	BBABBALLABB
N	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Mo_IGKV5-43*01	100.0	L2	8	L2-8-*	-1	KYASQSIS	ABLBLLBL
N	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	57.1	L3	9	L3-9-cis7-*	-1	QQSNSWPRT	BBABBBbLB
N	kappa	Homo.sapiens	Hu_IGKV3-11*01	98.6	Hu_IGKV3-11*01	100.0	L4	6	L4-6-*	-1	GSGTDF	BLaABB
O	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Mo_IGHV1-19*01	100.0	H1	13	H1-13-*	-1	KASGYTFTDYYMN	BBBLBBBLABBBB
O	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Mo_IGHV1-19*01	80.0	H2	10	H2-10-*	-1	VISPYNGGTT	BBBAABBBAL
O	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	0.0	H3	9	H3-9-*	-1	VYDLYYFDY	BBLAABBAB
O	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	87.5	H4	8	H4-8-*	-1	VDKSTSTA	BBAABABB
P	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Mo_IGHV1-19*01	100.0	H1	13	H1-13-*	-1	KASGYTFTDYYMN	BBBLBBBLABBBB
P	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Mo_IGHV1-19*01	80.0	H2	10	H2-10-*	-1	VISPYNGGTT	BBBAABBBAL
P	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	0.0	H3	9	H3-9-*	-1	VYDLYYFDY	BBLAABBAB
P	heavy	Homo.sapiens	Hu_IGHV1-69*17	87.7	Hu_IGHV1-69*17	87.5	H4	8	H4-8-*	-1	VDKSTSTA	BBAABABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022