PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LF1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	84.6	H1	13	H1-13-*	-1	KASGYTFFKYGIS	BBBLBBBLABBBB
D	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	50.0	H2	10	H2-10-*	-1	SISPYTGETH	BBBABLBBAL
D	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H3	18	H3-18-*	-1	AREGAYGyrspYQNWFDP
D	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H4	8	H4-8-*	-1	TDTSTSTA	BBAABABB
E	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	100.0	L1	11	L1-11-2	22	RASQSVSSYLA	BBABBALLABB
E	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	100.0	L2	8	L2-8-*	-1	YDASNRAT	ABLBLLBL
E	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	42.9	L3	9	L3-9-cis7-*	-1	QQHSLLPRT	BBAABBbLB
E	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	83.3	L4	6	L4-6-*	-1	GSGTDF	ELaABB
F	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	84.6	H1	13	H1-13-*	-1	KASGYTFFKYGIS	BBBLBBBLABBBB
F	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	50.0	H2	10	H2-10-*	-1	SISPYTGETH	BBBABLBBAL
F	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H3	18	H3-18-*	-1	AREGAYGyrspYQNWFDP
F	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H4	8	H4-8-*	-1	TDTSTSTA	BBAABABB
G	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	84.6	H1	13	H1-13-*	-1	KASGYTFFKYGIS	BBBLBBBLABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	50.0	H2	10	H2-10-*	-1	SISPYTGETH	BBBABLBBAL
G	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H3	18	H3-18-*	-1	AREGAYGyrspYQNWFDP
G	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H4	8	H4-8-*	-1	TDTSTSTA	BBAABABB
H	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	100.0	L1	11	L1-11-2	22	RASQSVSSYLA	BBABBALLABB
H	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	100.0	L2	8	L2-8-*	-1	YDASNRAT	ABLBLLBL
H	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	42.9	L3	9	L3-9-cis7-*	-1	QQHSLLPRT	BBAABBbLB
H	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	83.3	L4	6	L4-6-*	-1	GSGTDF	ELaABB
I	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	100.0	L1	11	L1-11-2	22	RASQSVSSYLA	BBABBALLABB
I	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	100.0	L2	8	L2-8-*	-1	YDASNRAT	ABLBLLBL
I	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	42.9	L3	9	L3-9-cis7-*	-1	QQHSLLPRT	BBAABBbLB
I	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	83.3	L4	6	L4-6-*	-1	GSGTDF	ELaABB
K	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	84.6	H1	13	H1-13-*	-1	KASGYTFFKYGIS	BBBLBBBLABBBB
K	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	50.0	H2	10	H2-10-*	-1	SISPYTGETH	BBBABLBBAL
K	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H3	18	H3-18-*	-1	AREGAYGyrspYQNWFDP
K	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H4	8	H4-8-*	-1	TDTSTSTA	BBAABABB
L	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	100.0	L1	11	L1-11-2	22	RASQSVSSYLA	BBABBALLABB
L	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	100.0	L2	8	L2-8-*	-1	YDASNRAT	ABLBLLBL
L	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	42.9	L3	9	L3-9-cis7-*	-1	QQHSLLPRT	BBAABBbLB
L	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	83.3	L4	6	L4-6-*	-1	GSGTDF	ELaABB
O	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	84.6	H1	13	H1-13-*	-1	KASGYTFFKYGIS	BBBLBBBLABBBB
O	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	50.0	H2	10	H2-10-*	-1	SISPYTGETH	BBBABLBBAL
O	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H3	18	H3-18-*	-1	AREGAYGyrspYQNWFDP
O	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H4	8	H4-8-*	-1	TDTSTSTA	BBAABABB
P	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	84.6	H1	13	H1-13-*	-1	KASGYTFFKYGIS	BBBLBBBLABBBB
P	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	50.0	H2	10	H2-10-*	-1	SISPYTGETH	BBBABLBBAL
P	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H3	18	H3-18-*	-1	AREGAYGyrspYQNWFDP
P	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H4	8	H4-8-*	-1	TDTSTSTA	BBAABABB
Q	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	100.0	L1	11	L1-11-2	22	RASQSVSSYLA	BBABBALLABB
Q	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	100.0	L2	8	L2-8-*	-1	YDASNRAT	ABLBLLBL
Q	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	42.9	L3	9	L3-9-cis7-*	-1	QQHSLLPRT	BBAABBbLB
Q	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	83.3	L4	6	L4-6-*	-1	GSGTDF	ELaABB
R	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	100.0	L1	11	L1-11-2	22	RASQSVSSYLA	BBABBALLABB
R	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	100.0	L2	8	L2-8-*	-1	YDASNRAT	ABLBLLBL
R	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	42.9	L3	9	L3-9-cis7-*	-1	QQHSLLPRT	BBAABBbLB
R	kappa	Homo.sapiens	Hu_IGKV3D-11*02	97.1	Hu_IGKV3D-11*02	83.3	L4	6	L4-6-*	-1	GSGTDF	ELaABB

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