PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7LDJ

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	92.3	H1	13	H1-13-*	-1	AVSGFTLDYYAIG	BBBEBBBABBBBB
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	80.0	H2	10	H2-10-*	-1	CISSSGGNTK	BBBAALBLBB
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	0.0	H3	23	H3-23-*	-1	AAIAATYYSgsyyfqcphDGMDY
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	87.5	H4	8	H4-8-*	-1	RDNAKNTF	BBAABBBB
F	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	92.3	H1	13	H1-13-*	-1	AVSGFTLDYYAIG	BBBEBBBABBBBB
F	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	80.0	H2	10	H2-10-*	-1	CISSSGGNTK	BBBAALBLBB
F	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	0.0	H3	23	H3-23-*	-1	AAIAATYYSgsyyfqcphDGMDY
F	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	87.5	H4	8	H4-8-*	-1	RDNAKNTF	BBAABBBB
G	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	92.3	H1	13	H1-13-*	-1	AVSGFTLDYYAIG	BBBEBBBABBBBB
G	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	80.0	H2	10	H2-10-*	-1	CISSSGGNTK	BBBAALBLBB
G	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	0.0	H3	23	H3-23-*	-1	AAIAATYYSgsyyfqcphDGMDY
G	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	87.5	H4	8	H4-8-*	-1	RDNAKNTF	BBAABBBB
H	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	92.3	H1	13	H1-13-*	-1	AVSGFTLDYYAIG	BBBEBBBABBBBB
H	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	80.0	H2	10	H2-10-*	-1	CISSSGGNTK	BBBAALBLBB
H	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	0.0	H3	23	H3-23-*	-1	AAIAATYYSgsyyfqcphDGMDY
H	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	94.5	Al_IGHV3S65*01_VHH	87.5	H4	8	H4-8-*	-1	RDNAKNTF	BBAABBBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022