PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KYL

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-16*01	95.9	Mo_IGHV5-16*01	92.3	H1	13	H1-13-1	11	TASGFTFSHYYMA	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-16*01	95.9	Mo_IGHV5-16*01	90.0	H2	10	H2-10-2	11	NINYDGTSTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-16*01	95.9	Mo_IGHV5-16*01	100.0	H3	17	H3-17-*	-1	AREEGYGNpypYWYFDV
H	heavy	Mus.musculus	Mo_IGHV5-16*01	95.9	Mo_IGHV5-16*01	87.5	H4	8	H4-8-1	5	RDNANNIL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-72*01	95.7	Mo_IGKV4-72*01	100.0	L1	10	L1-10-1	7	RASSSVSYMH	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-72*01	95.7	Mo_IGKV4-72*01	100.0	L2	8	L2-8-1	6	YATSNLAS	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV4-72*01	95.7	Mo_IGKV4-72*01	75.0	L3	9	L3-9-cis7-1	9	QQRSSNPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-72*01	95.7	Mo_IGKV4-72*01	100.0	L4	6	L4-6-1	12	GSGTSY	EBEABB
X	heavy	Mus.musculus	Mo_IGHV5-16*01	95.9	Mo_IGHV5-16*01	92.3	H1	13	H1-13-1	10	TASGFTFSHYYMA	BBBLBBAAABBBB
X	heavy	Mus.musculus	Mo_IGHV5-16*01	95.9	Mo_IGHV5-16*01	90.0	H2	10	H2-10-2	10	NINYDGTSTY	BBBAALABBB
X	heavy	Mus.musculus	Mo_IGHV5-16*01	95.9	Mo_IGHV5-16*01	100.0	H3	17	H3-17-*	-1	AREEGYGNpypYWYFDV
X	heavy	Mus.musculus	Mo_IGHV5-16*01	95.9	Mo_IGHV5-16*01	87.5	H4	8	H4-8-1	7	RDNANNIL	BBAAALBB
Y	kappa	Mus.musculus	Mo_IGKV4-72*01	95.7	Mo_IGKV4-72*01	100.0	L1	10	L1-10-1	7	RASSSVSYMH	BBABBBABBB
Y	kappa	Mus.musculus	Mo_IGKV4-72*01	95.7	Mo_IGKV4-72*01	100.0	L2	8	L2-8-1	6	YATSNLAS	BLLABBBB
Y	kappa	Mus.musculus	Mo_IGKV4-72*01	95.7	Mo_IGKV4-72*01	75.0	L3	9	L3-9-cis7-1	9	QQRSSNPRT	BBAABBbBB
Y	kappa	Mus.musculus	Mo_IGKV4-72*01	95.7	Mo_IGKV4-72*01	100.0	L4	6	L4-6-1	11	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022