PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KR5

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	100.0	H1	13	H1-13-1	17	AASGFTFNTYAMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	83.3	H2	12	H2-12-*	-1	RIRTksnNYATY
H	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	100.0	H3	11	H3-11-*	-1	VRQKYGNYFDY	BBBBLALBBAB
H	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	100.0	H4	8	H4-8-1	16	RDDSQSML	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	90.9	L1	11	L1-11-1	23	KASQNVGINVA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	75.0	L2	8	L2-8-*	-1	NSASYRNS	BLLABBBA
L	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	85.7	L3	9	L3-9-cis7-1	15	QQCNSYPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
M	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	100.0	H1	13	H1-13-1	17	AASGFTFNTYAMH	BBBLBBAAABBBB
M	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	83.3	H2	12	H2-12-*	-1	RIRTksnNYATY
M	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	100.0	H3	11	H3-11-*	-1	VRQKYGNYFDY	BBBBLALBBAB
M	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	100.0	H4	8	H4-8-1	19	RDDSQSML	BBAAALBB
N	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	90.9	L1	11	L1-11-1	23	KASQNVGINVA	BBABBAEABBB
N	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	75.0	L2	8	L2-8-*	-1	NSASYRNS	BLLABBBA
N	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	85.7	L3	9	L3-9-cis7-1	15	QQCNSYPLT	BBAABBbBB
N	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
O	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	100.0	H1	13	H1-13-1	17	AASGFTFNTYAMH	BBBLBBAAABBBB
O	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	83.3	H2	12	H2-12-*	-1	RIRTksnNYATY
O	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	100.0	H3	11	H3-11-*	-1	VRQKYGNYFDY	BBBBLALBBAB
O	heavy	Mus.musculus	Mo_IGHV10-3*01	100.0	Mo_IGHV10-3*01	100.0	H4	8	H4-8-1	18	RDDSQSML	BBAAALBB
P	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	90.9	L1	11	L1-11-1	23	KASQNVGINVA	BBABBAEABBB
P	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	75.0	L2	8	L2-8-*	-1	NSASYRNS	BLLABBBA
P	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	85.7	L3	9	L3-9-cis7-1	15	QQCNSYPLT	BBAABBbBB
P	kappa	Mus.musculus	Mo_IGKV6-15*01	95.7	Mo_IGKV6-15*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022