PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KQI

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	84.6	H1	13	H1-13-1	8	AASGFTFDDFTMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	20.0	H2	10	H2-10-*	-1	SINWKGNALD	BBBABAABBB
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	100.0	H3	20	H3-20-*	-1	AKDFRSSssmdyfYYYGMGV
A	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	10	RDNAKNSL	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	92.8	Hu_IGKV1-33*01	72.7	L1	11	L1-11-1	27	QASQDIRQCLN	BBABBALABBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	92.8	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	15	YDASTLET	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	92.8	Hu_IGKV1-33*01	57.1	L3	9	L3-9-2	15	QQFANvPLA	BBAABABBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	92.8	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	9	GSGTHF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022