PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KQH

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	92.3	H1	13	H1-13-1	11	AASGFTFDDYPMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	50.0	H2	10	H2-10-*	-1	SINWNGGSTD	BBBABAABBB
C	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	100.0	H3	20	H3-20-*	-1	AKDlrasssMDYYYYSGMDV
C	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	87.5	H4	8	H4-8-1	7	RDNARNSL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-*	-1	QASQGINNYLN	BBABBBBLBBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-*	-1	YDASNLQT	BLLLBBBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	71.4	L3	9	L3-9-*	-1	QQYENvPIT	BBABBEBBB
D	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	92.3	H1	13	H1-13-1	9	AASGFTFDDYPMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	50.0	H2	10	H2-10-2	15	SINWNGGSTD	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	100.0	H3	20	H3-20-*	-1	AKDlrasssMDYYYYSGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	91.8	Hu_IGHV3-9*01	87.5	H4	8	H4-8-1	9	RDNARNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	81.8	L1	11	L1-11-*	-1	QASQGINNYLN	BBABBBBLBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	15	YDASNLQT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	71.4	L3	9	L3-9-2	12	QQYENvPIT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV1-33*01	94.2	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022