PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KQB

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-30*13	93.2	Hu_IGHV3-30*13	84.6	H1	13	H1-13-1	12	AASGFTFSSYEMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*13	93.2	Hu_IGHV3-30*13	100.0	H2	10	H2-10-2	8	VISYDGSNKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*13	93.2	Hu_IGHV3-30*13	100.0	H3	12	H3-12-*	-1	ARLITMVRGEDY	BBBBBLBBBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*13	93.2	Hu_IGHV3-30*13	75.0	H4	8	H4-8-1	9	RDNAKNSL	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	13	RASQSISSYLN	BBABBAEABBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L2	8	L2-8-4	19	YAASSLQS	BEAABBBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	71.4	L3	9	L3-9-cis7-1	10	QQSYNLPRT	BBAABBbBB
J	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	23	GSGTDF	EBEABB
K	heavy	Homo.sapiens	Hu_IGHV3-30*13	93.2	Hu_IGHV3-30*13	84.6	H1	13	H1-13-1	12	AASGFTFSSYEMN	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV3-30*13	93.2	Hu_IGHV3-30*13	100.0	H2	10	H2-10-2	9	VISYDGSNKY	BBBAALABBB
K	heavy	Homo.sapiens	Hu_IGHV3-30*13	93.2	Hu_IGHV3-30*13	100.0	H3	12	H3-12-*	-1	ARLITMVRGEDY	BBBBAABBBBBB
K	heavy	Homo.sapiens	Hu_IGHV3-30*13	93.2	Hu_IGHV3-30*13	75.0	H4	8	H4-8-1	10	RDNAKNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L1	11	L1-11-1	16	RASQSISSYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L2	8	L2-8-*	-1	YAASSLQS	ABAABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	71.4	L3	9	L3-9-cis7-1	12	QQSYNLPRT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	97.1	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022