PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KPG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.7	Hu_IGHV3-30*10	76.9	H1	13	H1-13-1	8	EASGFTFSSNAMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.7	CDRLenMismatch	-1.0	H2	9	H2-9-1	12	GISSGSDTY	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.7	Hu_IGHV3-30*10	100.0	H3	11	H3-11-1	12	ARETWNHLFDY	BBBBAALBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-30*10	91.7	Hu_IGHV3-30*10	87.5	H4	8	H4-8-1	8	RDNSKNIL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	93.8	Hu_IGLV3-25*02	27.3	L1	11	L1-11-*	-1	SGGSYSSYYYA	BLBBAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	93.8	Hu_IGLV3-25*02	62.5	L2	8	L2-8-*	-1	YSDDKRPS	BLLABBBA
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	93.8	Hu_IGLV3-25*02	22.2	L3	11	L3-11-1	24	GGYDQSSYTNP	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV3-25*02	93.8	Hu_IGLV3-25*02	100.0	L4	6	L4-6-2	20	SSGTTV	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022