PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KPB

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Ra_IGHV5-20*01	97.2	Ra_IGHV5-20*01	92.3	H1	13	H1-13-1	11	AASGFTFSAYYMA	BBBLBBAAABBBB
H	heavy	Mus.musculus	Ra_IGHV5-20*01	97.2	Ra_IGHV5-20*01	60.0	H2	10	H2-10-2	10	SINYDGANTF	BBBAALABBB
H	heavy	Mus.musculus	Ra_IGHV5-20*01	97.2	Ra_IGHV5-20*01	100.0	H3	14	H3-14-*	-1	TTEAYGYNSNWFGY	BBBBBBBLBBBBAB
H	heavy	Mus.musculus	Ra_IGHV5-20*01	97.2	Ra_IGHV5-20*01	87.5	H4	8	H4-8-1	7	RDNARSSL	BBAAALBB
L	kappa	Mus.musculus	Ra_IGKV12S17*01	92.8	Ra_IGKV12S17*01	90.9	L1	11	L1-11-1	13	QASQDIGNWLS	BBABBAEAABB
L	kappa	Mus.musculus	Ra_IGKV12S17*01	92.8	Ra_IGKV12S17*01	100.0	L2	8	L2-8-1	8	YGATSLAD	BLLABBBB
L	kappa	Mus.musculus	Ra_IGKV12S17*01	92.8	Ra_IGKV12S17*01	71.4	L3	9	L3-9-cis7-1	8	LQGQSTPYT	BBAABBbBB
L	kappa	Mus.musculus	Ra_IGKV12S17*01	92.8	Ra_IGKV12S17*01	100.0	L4	6	L4-6-3	32	RSGTQY	BBAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022