PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KN5

#CDRs = 4; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	94.5	Al_IGHV3S61*01_VHH	92.3	H1	13	H1-13-*	-1	AASGVTLDYYAIG	BBBLBABABBBBB
C	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	94.5	Al_IGHV3S61*01_VHH	80.0	H2	10	H2-10-1	13	CIGSSDGRTY	BBBAAALBBB
C	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	94.5	Al_IGHV3S61*01_VHH	0.0	H3	22	H3-22-*	-1	ALTvgtyysgnYHYTCSDDMDY
C	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	94.5	Al_IGHV3S61*01_VHH	100.0	H4	8	H4-8-1	10	RDNAKNTV	BBAAALBB
D	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	94.5	Al_IGHV3S61*01_VHH	92.3	H1	13	H1-13-*	-1	AASGVTLDYYAIG	BBBLBABABBBBB
D	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	94.5	Al_IGHV3S61*01_VHH	80.0	H2	10	H2-10-1	11	CIGSSDGRTY	BBBAAALBBB
D	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	94.5	Al_IGHV3S61*01_VHH	0.0	H3	22	H3-22-*	-1	ALTvgtyysgnYHYTCSDDMDY
D	heavy	Vicugna.pacos	Al_IGHV3S61*01_VHH	94.5	Al_IGHV3S61*01_VHH	100.0	H4	8	H4-8-*	-1	RDNAKNTV	BBAABBBB
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	95.9	Al_IGHV3S65*01_VHH	100.0	H1	13	H1-13-1	17	AASGFTLDYYAIG	BBBLBBAAABBBB
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	95.9	Al_IGHV3S65*01_VHH	90.0	H2	10	H2-10-*	-1	CISSSGGSTH	BBBAALBBBB
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	95.9	Al_IGHV3S65*01_VHH	0.0	H3	19	H3-19-*	-1	AAQSGSYYwcgsdWHEYEY
E	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	95.9	Al_IGHV3S65*01_VHH	100.0	H4	8	H4-8-1	9	RDNAKNTV	BBAAALBB
F	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	95.9	Al_IGHV3S65*01_VHH	100.0	H1	13	H1-13-1	19	AASGFTLDYYAIG	BBBLBBAAABBBB
F	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	95.9	Al_IGHV3S65*01_VHH	90.0	H2	10	H2-10-*	-1	CISSSGGSTH	BBBAALBBBB
F	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	95.9	Al_IGHV3S65*01_VHH	0.0	H3	19	H3-19-*	-1	AAQSGSYYwcgsdWHEYEY
F	heavy	Vicugna.pacos	Al_IGHV3S65*01_VHH	95.9	Al_IGHV3S65*01_VHH	100.0	H4	8	H4-8-1	9	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022