PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KM6

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H1	13	H1-13-1	8	AASGFTFSSYGMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H2	10	H2-10-2	7	TISSGGSYTY	BBBAALABBB
H	heavy	Homo.sapiens	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H3	11	H3-11-*	-1	ARGGEGYYFDY	BBEELLBBBAB
H	heavy	Homo.sapiens	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H4	8	H4-8-1	5	RDNAKNTL	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L1	17	L1-17-1	5	KSSQSLlyssnqKNYLA	BBABBABBAAALBBBBB
L	kappa	Homo.sapiens	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	7	YWASTRES	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L3	9	L3-9-cis7-1	7	QQYYSYPYT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
h	heavy	Homo.sapiens	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H1	13	H1-13-1	9	AASGFTFSSYGMS	BBBLBBAAABBBB
h	heavy	Homo.sapiens	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H2	10	H2-10-2	7	TISSGGSYTY	BBBAALABBB
h	heavy	Homo.sapiens	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H3	11	H3-11-*	-1	ARGGEGYYFDY	BBEELLBBBAB
h	heavy	Homo.sapiens	Mo_IGHV5-6*01	98.6	Mo_IGHV5-6*01	100.0	H4	8	H4-8-1	5	RDNAKNTL	BBAAALBB
l	kappa	Homo.sapiens	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L1	17	L1-17-1	5	KSSQSLlyssnqKNYLA	BBABBABBAAALBBBBB
l	kappa	Homo.sapiens	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L2	8	L2-8-1	7	YWASTRES	BLLABBBB
l	kappa	Homo.sapiens	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L3	9	L3-9-cis7-1	8	QQYYSYPYT	BBAABBbBB
l	kappa	Homo.sapiens	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022