PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KKJ

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Synthetic.construct	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	76.9	H1	13	H1-13-*	-1	AASGYIFGRNAMG	BBBLBBAEABBBB
A	heavy	Synthetic.construct	Al_IGHV3S53*01_VHH	97.3	CDRLenMismatch	-1.0	H2	10	H2-10-6	17	GITRRGSITY	BBBABLLBBB
A	heavy	Synthetic.construct	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	50.0	H3	12	H3-12-*	-1	AADPASPAYGDY	BBBBABBBBEBB
A	heavy	Synthetic.construct	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	100.0	H4	8	H4-8-1	7	RDNAKNTV	BBAAALBB
C	heavy	Synthetic.construct	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	76.9	H1	13	H1-13-*	-1	AASGYIFGRNAMG	BBBLBBAEABBBB
C	heavy	Synthetic.construct	Al_IGHV3S53*01_VHH	97.3	CDRLenMismatch	-1.0	H2	10	H2-10-6	17	GITRRGSITY	BBBABLLBBB
C	heavy	Synthetic.construct	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	50.0	H3	12	H3-12-*	-1	AADPASPAYGDY	BBBBABBBABBB
C	heavy	Synthetic.construct	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	100.0	H4	8	H4-8-1	10	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022