PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KJH

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	95.9	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-*	-1	TASGRTFSNTVMG	BBBEBBBAABBBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	95.9	Al_IGHV3-3*01_VHH	60.0	H2	10	H2-10-*	-1	HILWSGGLAY	BBBAALBLBB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	95.9	Al_IGHV3-3*01_VHH	100.0	H3	13	H3-13-*	-1	AARDFGFGNNYDY	BBBBBEBLBBBAB
A	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	95.9	Al_IGHV3-3*01_VHH	87.5	H4	8	H4-8-*	-1	RDNAKNIV	BBAABBBB
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	95.9	Al_IGHV3-3*01_VHH	69.2	H1	13	H1-13-*	-1	TASGRTFSNTVMG	BBBEBBBAABBBB
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	95.9	Al_IGHV3-3*01_VHH	60.0	H2	10	H2-10-*	-1	HILWSGGLAY	BBBAALBLBB
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	95.9	Al_IGHV3-3*01_VHH	100.0	H3	13	H3-13-*	-1	AARDFGFGNNYDY	BBBBBEBLBBBAB
B	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	95.9	Al_IGHV3-3*01_VHH	87.5	H4	8	H4-8-*	-1	RDNAKNIV	BBAABBBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022