PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KF1

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Mo_IGHV14-3*02	84.6	H1	13	H1-13-1	13	AASGFNIKDTYIH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Mo_IGHV14-3*02	60.0	H2	10	H2-10-1	10	RIYPTNGYTR	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	50.0	H3	14	H3-14-*	-1	AKLGIGYYYYGMDV	BBBBBEAABAEBAB
A	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	7	ADTSKNTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV3-12*01	33.3	L1	15	L1-15-*	-1	RASQdiprSISGYVA	BBABBBBAABBLABB
B	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV3-12*01	50.0	L2	8	L2-8-1	6	YWGSYLYS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	42.9	L3	9	L3-9-cis7-1	16	QQHYTTPPT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Mo_IGHV14-3*02	84.6	H1	13	H1-13-1	13	AASGFNIKDTYIH	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Mo_IGHV14-3*02	60.0	H2	10	H2-10-1	9	RIYPTNGYTR	BBBAAALBBB
D	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	50.0	H3	14	H3-14-*	-1	AKLGIGYYYYGMDV	BBBBBEAABAEBAB
D	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	7	ADTSKNTA	BBAAALBB
E	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV3-12*01	33.3	L1	15	L1-15-*	-1	RASQdiprSISGYVA	BBABBBBAABBLABB
E	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV3-12*01	50.0	L2	8	L2-8-1	6	YWGSYLYS	BLLABBBB
E	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	42.9	L3	9	L3-9-cis7-1	17	QQHYTTPPT	BBAABBbBB
E	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Mo_IGHV14-3*02	84.6	H1	13	H1-13-1	13	AASGFNIKDTYIH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Mo_IGHV14-3*02	60.0	H2	10	H2-10-1	9	RIYPTNGYTR	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	50.0	H3	14	H3-14-*	-1	AKLGIGYYYYGMDV	BBBBBEAABAEBAB
G	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	8	ADTSKNTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Mo_IGHV14-3*02	84.6	H1	13	H1-13-1	13	AASGFNIKDTYIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Mo_IGHV14-3*02	60.0	H2	10	H2-10-1	9	RIYPTNGYTR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	50.0	H3	14	H3-14-*	-1	AKLGIGYYYYGMDV	BBBBBEAABAEBAB
H	heavy	Homo.sapiens	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	7	ADTSKNTA	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV3-12*01	33.3	L1	15	L1-15-*	-1	RASQdiprSISGYVA	BBABBBBAABBLABB
I	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV3-12*01	50.0	L2	8	L2-8-1	5	YWGSYLYS	BLLABBBB
I	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	42.9	L3	9	L3-9-cis7-1	12	QQHYTTPPT	BBAABBbBB
I	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV3-12*01	33.3	L1	15	L1-15-*	-1	RASQdiprSISGYVA	BBABBBBAABBLABB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Mo_IGKV3-12*01	50.0	L2	8	L2-8-1	6	YWGSYLYS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	42.9	L3	9	L3-9-cis7-1	16	QQHYTTPPT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-6*01	100.0	Hu_IGKV1-6*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022