PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KEX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV1-69*08	86.3	Hu_IGHV1-69*08	69.2	H1	13	H1-13-1	15	KASGGTFIDYTYN	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*08	86.3	Hu_IGHV1-69*08	40.0	H2	10	H2-10-1	15	RVVPGLGLSS	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*08	86.3	Hu_IGHV1-69*08	100.0	H3	14	H3-14-*	-1	ARDTASFGWLPFAF	BBBAAAALBABBAB
G	heavy	Homo.sapiens	Hu_IGHV1-69*08	86.3	Hu_IGHV1-69*08	75.0	H4	8	H4-8-1	11	AAKSTSTV	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*08	86.3	Hu_IGHV1-69*08	69.2	H1	13	H1-13-1	15	KASGGTFIDYTYN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*08	86.3	Hu_IGHV1-69*08	40.0	H2	10	H2-10-1	15	RVVPGLGLSS	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*08	86.3	Hu_IGHV1-69*08	100.0	H3	14	H3-14-*	-1	ARDTASFGWLPFAF	BBBAAAALBABBAB
H	heavy	Homo.sapiens	Hu_IGHV1-69*08	86.3	Hu_IGHV1-69*08	75.0	H4	8	H4-8-1	11	AAKSTSTV	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV1-69*08	86.3	Hu_IGHV1-69*08	69.2	H1	13	H1-13-1	15	KASGGTFIDYTYN	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV1-69*08	86.3	Hu_IGHV1-69*08	40.0	H2	10	H2-10-1	15	RVVPGLGLSS	BBBAAALBBB
I	heavy	Homo.sapiens	Hu_IGHV1-69*08	86.3	Hu_IGHV1-69*08	100.0	H3	14	H3-14-*	-1	ARDTASFGWLPFAF	BBBAAAALBABBAB
I	heavy	Homo.sapiens	Hu_IGHV1-69*08	86.3	Hu_IGHV1-69*08	75.0	H4	8	H4-8-1	11	AAKSTSTV	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.0	Hu_IGKV3-20*01	58.3	L1	12	L1-12-1	8	GVSQSISsTYFA	BBABBBBAAABB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.0	Hu_IGKV3-20*01	75.0	L2	8	L2-8-1	20	YGASNRAS	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.0	Hu_IGKV3-20*01	100.0	L3	8	L3-8-3	13	QQYGSSPT	BBAABBBB
J	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.0	Hu_IGKV3-20*01	83.3	L4	6	L4-6-2	19	ASGTDF	BBEABB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.0	Hu_IGKV3-20*01	58.3	L1	12	L1-12-1	8	GVSQSISsTYFA	BBABBBBAAABB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.0	Hu_IGKV3-20*01	75.0	L2	8	L2-8-1	20	YGASNRAS	BLLABBBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.0	Hu_IGKV3-20*01	100.0	L3	8	L3-8-3	13	QQYGSSPT	BBAABBBB
K	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.0	Hu_IGKV3-20*01	83.3	L4	6	L4-6-2	19	ASGTDF	BBEABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.0	Hu_IGKV3-20*01	58.3	L1	12	L1-12-1	8	GVSQSISsTYFA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.0	Hu_IGKV3-20*01	75.0	L2	8	L2-8-1	20	YGASNRAS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.0	Hu_IGKV3-20*01	100.0	L3	8	L3-8-3	13	QQYGSSPT	BBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	94.0	Hu_IGKV3-20*01	83.3	L4	6	L4-6-2	19	ASGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022