PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KEJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	53.8	H1	13	H1-13-*	-1	KASGATFGSDTVT	BBBLBBAEABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	80.0	H2	10	H2-10-1	13	GIIPFFGEAN	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H3	21	H3-21-*	-1	ARQINEmatfgeiHYYTYMDV
G	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	87.5	H4	8	H4-8-1	12	ADKSTNTA	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	53.8	H1	13	H1-13-*	-1	KASGATFGSDTVT	BBBLBBAEABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	80.0	H2	10	H2-10-1	13	GIIPFFGEAN	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H3	21	H3-21-*	-1	ARQINEmatfgeiHYYTYMDV
H	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	87.5	H4	8	H4-8-1	12	ADKSTNTA	BBAAALBB
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	53.8	H1	13	H1-13-*	-1	KASGATFGSDTVT	BBBLBBAEABBBB
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	80.0	H2	10	H2-10-1	13	GIIPFFGEAN	BBBAAALBBB
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	100.0	H3	21	H3-21-*	-1	ARQINEmatfgeiHYYTYMDV
I	heavy	Homo.sapiens	Hu_IGHV1-69*17	95.9	Hu_IGHV1-69*17	87.5	H4	8	H4-8-1	12	ADKSTNTA	BBAAALBB
J	lambda	Homo.sapiens	Hu_IGLV3-19*01	95.5	Hu_IGLV3-19*01	90.9	L1	11	L1-11-4	21	QGDSLRNYYAS	BEAAAAABBBB
J	lambda	Homo.sapiens	Hu_IGLV3-19*01	95.5	Hu_IGLV3-19*01	100.0	L2	8	L2-8-*	-1	YGKNNRPS	BEAABBBB
J	lambda	Homo.sapiens	Hu_IGLV3-19*01	95.5	Hu_IGLV3-19*01	88.9	L3	11	L3-11-1	17	NSRDSSSNHLV	BBBBAAALBBB
J	lambda	Homo.sapiens	Hu_IGLV3-19*01	95.5	Hu_IGLV3-19*01	100.0	L4	6	L4-6-2	13	SSGNTA	BBEABB
K	lambda	Homo.sapiens	Hu_IGLV3-19*01	95.5	Hu_IGLV3-19*01	90.9	L1	11	L1-11-4	21	QGDSLRNYYAS	BEAAAAABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-19*01	95.5	Hu_IGLV3-19*01	100.0	L2	8	L2-8-*	-1	YGKNNRPS	BEAABBBB
K	lambda	Homo.sapiens	Hu_IGLV3-19*01	95.5	Hu_IGLV3-19*01	88.9	L3	11	L3-11-1	17	NSRDSSSNHLV	BBBBAAALBBB
K	lambda	Homo.sapiens	Hu_IGLV3-19*01	95.5	Hu_IGLV3-19*01	100.0	L4	6	L4-6-2	13	SSGNTA	BBEABB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	95.5	Hu_IGLV3-19*01	90.9	L1	11	L1-11-4	21	QGDSLRNYYAS	BEAAAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	95.5	Hu_IGLV3-19*01	100.0	L2	8	L2-8-*	-1	YGKNNRPS	BEAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	95.5	Hu_IGLV3-19*01	88.9	L3	11	L3-11-1	17	NSRDSSSNHLV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV3-19*01	95.5	Hu_IGLV3-19*01	100.0	L4	6	L4-6-2	13	SSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022