PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KD2

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	94.5	Al_IGHV3S53*01_VHH	76.9	H1	13	H1-13-*	-1	AASgSISSPNVMG
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	94.5	Al_IGHV3S53*01_VHH	55.6	H2	9	H2-9-1	16	TMTSGGNTY	BBBAALBBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	94.5	Al_IGHV3S53*01_VHH	100.0	H3	12	H3-12-*	-1	NARDMWDRSHEY	BBBBAABAABBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	94.5	Al_IGHV3S53*01_VHH	100.0	H4	8	H4-8-*	-1	RDNAKNTV	BALABLBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022