PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KCR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-30*02	83.6	Hu_IGHV3-30*02	61.5	H1	13	H1-13-1	15	TASGFTFRNFGIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*02	83.6	Hu_IGHV3-30*02	90.0	H2	10	H2-10-2	19	FIRYDGRNKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*02	83.6	Hu_IGHV3-30*02	50.0	H3	14	H3-14-*	-1	AADGEETSPGSFDY	BBBBBLABBLBBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*02	83.6	Hu_IGHV3-30*02	75.0	H4	8	H4-8-1	10	RDNSKNMV	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	63.6	L1	11	L1-11-2	20	RASESVSTVLN	BBABBALLBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	75.0	L2	8	L2-8-1	27	YAASTLPS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	71.4	L3	9	L3-9-cis7-1	16	QQSYFSPRT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	89.9	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	19	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022