PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KC9

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	91.8	Al_IGHV3-3*01_VHH	92.3	H1	13	H1-13-*	-1	AASGrtfSDYAMG
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	91.8	Al_IGHV3-3*01_VHH	60.0	H2	10	H2-10-*	-1	GITSSGGGTY	BBBAAELBBB
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	91.8	Al_IGHV3-3*01_VHH	0.0	H3	15	H3-15-*	-1	KGTADgSSSLGYLEV
C	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	91.8	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	13	RDNYKNTL	BBAAALBB
F	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	91.8	Al_IGHV3-3*01_VHH	92.3	H1	13	H1-13-*	-1	AASgrtfSDYAMG
F	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	91.8	Al_IGHV3-3*01_VHH	60.0	H2	10	H2-10-*	-1	GITSSGGGTY	BBBAAELBBB
F	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	91.8	Al_IGHV3-3*01_VHH	0.0	H3	15	H3-15-*	-1	KGTADgSSSLGYLEV
F	heavy	Vicugna.pacos	Al_IGHV3-3*01_VHH	91.8	Al_IGHV3-3*01_VHH	75.0	H4	8	H4-8-1	13	RDNYKNTL	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022