PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KBO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	90.9	L1	11	L1-11-1	11	RASQDISSYLN	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	62.5	L2	8	L2-8-1	8	YYTSSLHS	BLEABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	42.9	L3	9	L3-9-cis7-1	8	QQYSKFPWT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-*	-1	RSGTDF	BBBLBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*03	87.7	CDRLenMismatch	-1.0	H1	15	H1-15-1	13	AASGFSLSTSgiGVT	BBBLBBAABBLBBBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*03	87.7	CDRLenMismatch	-1.0	H2	9	H2-9-1	15	TIWWDDDNR	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*03	87.7	Hu_IGHV3-33*03	50.0	H3	15	H3-15-*	-1	AQSaitsvtdSAMDH
A	heavy	Homo.sapiens	Hu_IGHV3-33*03	87.7	Hu_IGHV3-33*03	62.5	H4	8	H4-8-1	8	ADTSKNTA	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022