PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7KBA

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-72*01	79.5	Hu_IGHV3-72*01	84.6	H1	13	H1-13-1	11	AASGFSFSDHDMD	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-72*01	79.5	Hu_IGHV3-72*01	66.7	H2	12	H2-12-*	-1	RSRNKdySSTTE	BBBBLABABABB
A	heavy	Homo.sapiens	Hu_IGHV3-72*01	79.5	Hu_IGHV3-72*01	100.0	H3	19	H3-19-*	-1	ARGPHHsdrsgYYGGTFDI
A	heavy	Homo.sapiens	Hu_IGHV3-72*01	79.5	Hu_IGHV3-72*01	37.5	H4	8	H4-8-*	-1	RHTSEDLL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	91.3	Hu_IGKV1-12*01	100.0	L1	11	L1-11-1	8	RASQGISSWLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	91.3	Hu_IGKV1-12*01	62.5	L2	8	L2-8-1	8	YDASTLES	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	91.3	Hu_IGKV1-12*01	71.4	L3	9	L3-9-cis7-1	7	QQGNMFPLT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	91.3	Hu_IGKV1-12*01	83.3	L4	6	L4-6-1	9	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-72*01	79.5	Hu_IGHV3-72*01	84.6	H1	13	H1-13-1	10	AASGFSFSDHDMD	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-72*01	79.5	Hu_IGHV3-72*01	66.7	H2	12	H2-12-*	-1	RSRNKdySSTTE	BBBBAABABABB
H	heavy	Homo.sapiens	Hu_IGHV3-72*01	79.5	Hu_IGHV3-72*01	100.0	H3	19	H3-19-*	-1	ARGPHHsdrsgYYGGTFDI
H	heavy	Homo.sapiens	Hu_IGHV3-72*01	79.5	Hu_IGHV3-72*01	37.5	H4	8	H4-8-*	-1	RHTSEDLL	BBAABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	91.3	Hu_IGKV1-12*01	100.0	L1	11	L1-11-1	8	RASQGISSWLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	91.3	Hu_IGKV1-12*01	62.5	L2	8	L2-8-1	7	YDASTLES	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	91.3	Hu_IGKV1-12*01	71.4	L3	9	L3-9-cis7-1	9	QQGNMFPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-12*01	91.3	Hu_IGKV1-12*01	83.3	L4	6	L4-6-1	7	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022