PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7K9H

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV2-9-1*01	98.6	Mo_IGHV2-9-1*01	84.6	H1	13	H1-13-1	17	TVSGFSLINYAIS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV2-9-1*01	98.6	Mo_IGHV2-9-1*01	100.0	H2	9	H2-9-*	-1	VIWTGGGTN	BBBAAEEBB
H	heavy	Mus.musculus	Mo_IGHV2-9-1*01	98.6	Mo_IGHV2-9-1*01	100.0	H3	14	H3-14-*	-1	ARKDYYGRYYGMDY	BBBBAABABABBAB
H	heavy	Mus.musculus	Mo_IGHV2-9-1*01	98.6	Mo_IGHV2-9-1*01	100.0	H4	8	H4-8-1	12	KDNSKSQV	BBAAALBB
I	heavy	Mus.musculus	Mo_IGHV2-9-1*01	98.6	Mo_IGHV2-9-1*01	84.6	H1	13	H1-13-1	16	TVSGFSLINYAIS	BBBLBBAAABBBB
I	heavy	Mus.musculus	Mo_IGHV2-9-1*01	98.6	Mo_IGHV2-9-1*01	100.0	H2	9	H2-9-*	-1	VIWTGGGTN	BBBAAEEBB
I	heavy	Mus.musculus	Mo_IGHV2-9-1*01	98.6	Mo_IGHV2-9-1*01	100.0	H3	14	H3-14-*	-1	ARKDYYGRYYGMDY	BBBBAABABABBAB
I	heavy	Mus.musculus	Mo_IGHV2-9-1*01	98.6	Mo_IGHV2-9-1*01	100.0	H4	8	H4-8-1	7	KDNSKSQV	BBAAALBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L1	14	L1-14-*	-1	RSSTGAVTtSNYAN	BBAAEBBBAABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L2	8	L2-8-1	13	GGTNNRAP	BLLABBBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	75.0	L3	9	L3-9-3	23	ALWYNNHWV	BBBBAABBB
L	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-*	-1	LIGDKA	BABABB
M	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L1	14	L1-14-*	-1	RSSTGAVTtSNYAN	BBAAEBBBAABBBB
M	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L2	8	L2-8-1	13	GGTNNRAP	BLLABBBB
M	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	75.0	L3	9	L3-9-3	27	ALWYNNHWV	BBBBAABBB
M	lambda	Mus.musculus	Mo_IGLV1*01	100.0	Mo_IGLV1*01	100.0	L4	6	L4-6-*	-1	LIGDKA	BABABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022