PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7K8Z

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	100.0	H1	13	H1-13-1	11	AASGFTFSSYAMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	70.0	H2	10	H2-10-2	11	VIPFDGRNKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	50.0	H3	12	H3-12-*	-1	ASSSGYLFHSDY	BBBABABBBAAA
H	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	90.9	L1	11	L1-11-*	-1	RASQSISNWLA	BBABBAAABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	87.5	L2	8	L2-8-1	13	YEASSLES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	85.7	L3	9	L3-9-cis7-1	10	QQYNSYPWT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	8	GSGTEF	EBEABB
M	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	100.0	H1	13	H1-13-1	11	AASGFTFSSYAMH	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	70.0	H2	10	H2-10-2	13	VIPFDGRNKY	BBBAALABBB
M	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	50.0	H3	12	H3-12-*	-1	ASSSGYLFHSDY	BBBABABBBAAA
M	heavy	Homo.sapiens	Hu_IGHV3-30-3*02	98.6	Hu_IGHV3-30-3*02	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
N	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	90.9	L1	11	L1-11-*	-1	RASQSISNWLA	BBABBAAABBB
N	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	87.5	L2	8	L2-8-1	13	YEASSLES	BLLABBBB
N	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	85.7	L3	9	L3-9-cis7-1	10	QQYNSYPWT	BBAABBbBB
N	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	8	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022