PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7K8V

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H1	13	H1-13-1	13	KGSGYSFTSYWIG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H2	10	H2-10-1	20	IIYPGDSDTR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H3	21	H3-21-*	-1	ARSFRDDpriavagPADAFDI
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	17	ADKSISTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	90.9	L1	11	L1-11-*	-1	RASQSISYWLA	BBABBAAABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	87.5	L2	8	L2-8-1	19	YQASSLES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	85.7	L3	9	L3-9-cis7-1	11	QQYNSYPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	83.3	L4	6	L4-6-2	14	ESGTEF	BBEABB
M	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H1	13	H1-13-1	22	KGSGYSFTSYWIG	BBBLBBAAABBBB
M	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H2	10	H2-10-1	17	IIYPGDSDTR	BBBAAALBBB
M	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H3	21	H3-21-*	-1	ARSFRDDpriavagPADAFDI
M	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	20	ADKSISTA	BBAAALBB
N	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	90.9	L1	11	L1-11-*	-1	RASQSISYWLA	BBABBAAABBB
N	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	87.5	L2	8	L2-8-1	22	YQASSLES	BLLABBBB
N	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	85.7	L3	9	L3-9-cis7-1	13	QQYNSYPYT	BBAABBbBB
N	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	83.3	L4	6	L4-6-2	14	ESGTEF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022