PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7K8U

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-34*01	95.9	Hu_IGHV4-34*01	92.3	H1	13	H1-13-1	14	AVYGGSLSGYYWS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-34*01	95.9	Hu_IGHV4-34*01	77.8	H2	9	H2-9-1	15	EINHFGSTG	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-34*01	95.9	Hu_IGHV4-34*01	100.0	H3	17	H3-17-*	-1	ARkpllysnlspgafdi
H	heavy	Homo.sapiens	Hu_IGHV4-34*01	95.9	Hu_IGHV4-34*01	87.5	H4	8	H4-8-1	10	VDTSKSQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	83.3	L1	12	L1-12-2	8	WASQSVSaSYLA	BBABBBBLLBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	17	YGASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	71.4	L3	9	L3-9-2	12	QQYGTTPRT	BBAABABBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022