PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7K5Y

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
M	heavy	Mus.musculus	Mo_IGHV1-14*01	90.4	Mo_IGHV1-14*01	76.9	H1	13	H1-13-1	8	KASGYTFTSYTIQ	BBBLBBAAABBBB
M	heavy	Mus.musculus	Mo_IGHV1-14*01	90.4	Mo_IGHV1-14*01	90.0	H2	10	H2-10-1	10	YIYPYNAGTK	BBBAAALBBB
M	heavy	Mus.musculus	Mo_IGHV1-14*01	90.4	Mo_IGHV1-14*01	100.0	H3	13	H3-13-*	-1	ARKSSRLRSTLDY	BBBBABAABBBAB
M	heavy	Mus.musculus	Mo_IGHV1-14*01	90.4	Mo_IGHV1-14*01	87.5	H4	8	H4-8-1	7	SDKSSSTV	BBAAALBB
M	kappa	Mus.musculus	Mo_IGKV14-126*01	94.2	Mo_IGKV14-126*01	90.9	L1	11	L1-11-2	10	KASQDIRSYLS	BBABBALLBBB
M	kappa	Mus.musculus	Mo_IGKV14-126*01	94.2	Mo_IGKV14-126*01	100.0	L2	8	L2-8-1	11	YYATSLAD	BLLABBBB
M	kappa	Mus.musculus	Mo_IGKV14-126*01	94.2	Mo_IGKV14-126*01	100.0	L3	9	L3-9-2	8	LQHGESPYT	BBAABABBB
M	kappa	Mus.musculus	Mo_IGKV14-126*01	94.2	Mo_IGKV14-126*01	83.3	L4	6	L4-6-1	12	GSGQDF	EBEABB
N	heavy	Mus.musculus	Mo_IGHV1-14*01	90.4	Mo_IGHV1-14*01	76.9	H1	13	H1-13-1	8	KASGYTFTSYTIQ	BBBLBBAAABBBB
N	heavy	Mus.musculus	Mo_IGHV1-14*01	90.4	Mo_IGHV1-14*01	90.0	H2	10	H2-10-1	9	YIYPYNAGTK	BBBAAALBBB
N	heavy	Mus.musculus	Mo_IGHV1-14*01	90.4	Mo_IGHV1-14*01	100.0	H3	13	H3-13-*	-1	ARKSSRLRSTLDY	BBBBABAABBBAB
N	heavy	Mus.musculus	Mo_IGHV1-14*01	90.4	Mo_IGHV1-14*01	87.5	H4	8	H4-8-1	4	SDKSSSTV	BBAAALBB
N	kappa	Mus.musculus	Mo_IGKV14-126*01	94.2	Mo_IGKV14-126*01	90.9	L1	11	L1-11-2	13	KASQDIRSYLS	BBABBALLBBB
N	kappa	Mus.musculus	Mo_IGKV14-126*01	94.2	Mo_IGKV14-126*01	100.0	L2	8	L2-8-1	13	YYATSLAD	BLLABBBB
N	kappa	Mus.musculus	Mo_IGKV14-126*01	94.2	Mo_IGKV14-126*01	100.0	L3	9	L3-9-2	10	LQHGESPYT	BBAABABBB
N	kappa	Mus.musculus	Mo_IGKV14-126*01	94.2	Mo_IGKV14-126*01	83.3	L4	6	L4-6-1	9	GSGQDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022