PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7JZ4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	42.9	H1	14	H1-14-2	14	AVSGDYVnTNRRWS	BBBLBBABBBBBBB
A	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	55.6	H2	9	H2-9-1	7	EVHQSGRTN	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	100.0	H3	11	H3-11-*	-1	ARASSQYYVDV
A	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	100.0	H4	8	H4-8-1	12	VDKSKNQF	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	63.6	L1	11	L1-11-2	9	RASQHINDSLA	BBABBALLBBB
B	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	62.5	L2	8	L2-8-1	10	YGASNLHS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	42.9	L3	9	L3-9-2	19	QQCNCFPPD	BBAABABBB
B	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	42.9	H1	14	H1-14-2	15	AVSGDYVnTNRRWS	BBBLBBABBBBBBB
C	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	55.6	H2	9	H2-9-1	8	EVHQSGRTN	BBBAALBBB
C	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	100.0	H3	11	H3-11-*	-1	ARASSQYYvdv
C	heavy	Homo.sapiens	Hu_IGHV4-4*02	89.0	Hu_IGHV4-4*02	100.0	H4	8	H4-8-1	12	VDKSKNQF	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	63.6	L1	11	L1-11-2	9	RASQHINDSLA	BBABBALLBBB
D	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	62.5	L2	8	L2-8-1	10	YGASNLHS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	42.9	L3	9	L3-9-2	19	QQCNCFPPD	BBAABABBB
D	kappa	Homo.sapiens	Hu_IGKV1-8*01	85.3	Hu_IGKV1-8*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022