PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7JWG

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	84.6	H1	13	H1-13-1	15	QVSGYSFTSYWIG	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	90.0	H2	10	H2-10-1	17	FIYPGDSDTR	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H3	14	H3-14-*	-1	ARGILRYFDWFLDY	BBBALBLABBBBAB
A	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	14	ADKSISTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-13*02	98.4	Hu_IGKV1-13*02	81.8	L1	11	L1-11-*	-1	RASQGISSGSA	BBABBBALEBB
B	kappa	Homo.sapiens	Hu_IGKV1-13*02	98.4	Hu_IGKV1-13*02	87.5	L2	8	L2-8-*	-1	YDVSSLES	BLABAbBB
B	kappa	Homo.sapiens	Hu_IGKV1-13*02	98.4	Hu_IGKV1-13*02	85.7	L3	9	L3-9-*	-1	QQFNSYLLT	BBABABAbA
B	kappa	Homo.sapiens	Hu_IGKV1-13*02	98.4	Hu_IGKV1-13*02	83.3	L4	6	L4-6-1	10	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	84.6	H1	13	H1-13-1	15	QVSGYSFTSYWIG	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	90.0	H2	10	H2-10-1	17	FIYPGDSDTR	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H3	14	H3-14-*	-1	ARGILRYFDWFLDY	BBBALBLABBBBAB
H	heavy	Homo.sapiens	Hu_IGHV5-51*01	95.9	Hu_IGHV5-51*01	100.0	H4	8	H4-8-1	14	ADKSISTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-13*02	98.4	Hu_IGKV1-13*02	81.8	L1	11	L1-11-*	-1	RASQGISSGSA	BBABBBALEBB
L	kappa	Homo.sapiens	Hu_IGKV1-13*02	98.4	Hu_IGKV1-13*02	87.5	L2	8	L2-8-*	-1	YDVSSLES	BLABAbBB
L	kappa	Homo.sapiens	Hu_IGKV1-13*02	98.4	Hu_IGKV1-13*02	85.7	L3	9	L3-9-*	-1	QQFNSYLLT	BBABABBaA
L	kappa	Homo.sapiens	Hu_IGKV1-13*02	98.4	Hu_IGKV1-13*02	83.3	L4	6	L4-6-1	10	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022