PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7JTR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	84.6	H1	13	H1-13-1	10	KASGYTFTNSWMH	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	70.0	H2	10	H2-10-1	8	NIFPGNGNTN	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	100.0	H3	7	H3-7-*	-1	TRGLFAY	BBEBLAB
B	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	87.5	H4	8	H4-8-1	9	VDTSSNTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	82.4	L1	17	L1-17-*	-1	KSSQSLlinnnqKNYLA
B	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	100.0	L2	8	L2-8-1	9	YFASTRES	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	57.1	L3	9	L3-9-cis7-*	-1	QQHFTAPYT	BBAABBaLB
B	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	84.6	H1	13	H1-13-1	10	KASGYTFTNSWMH	BBBLBBAAABBBB
D	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	70.0	H2	10	H2-10-1	9	NIFPGNGNTN	BBBAAALBBB
D	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	100.0	H3	7	H3-7-*	-1	TRGLFAY	BBEBLAB
D	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	87.5	H4	8	H4-8-1	8	VDTSSNTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	82.4	L1	17	L1-17-*	-1	KSSQSLlinnnqKNYLA
D	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	100.0	L2	8	L2-8-1	8	YFASTRES	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	57.1	L3	9	L3-9-cis7-*	-1	QQHFTAPYT	BBAABBaLB
D	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
F	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	84.6	H1	13	H1-13-1	10	KASGYTFTNSWMH	BBBLBBAAABBBB
F	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	70.0	H2	10	H2-10-1	8	NIFPGNGNTN	BBBAAALBBB
F	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	100.0	H3	7	H3-7-*	-1	TRGLFAY	BBEBLAB
F	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	87.5	H4	8	H4-8-1	8	VDTSSNTA	BBAAALBB
F	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	82.4	L1	17	L1-17-*	-1	KSSQSLlinnnqKNYLA
F	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	100.0	L2	8	L2-8-1	8	YFASTRES	BLLABBBB
F	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	57.1	L3	9	L3-9-cis7-*	-1	QQHFTAPYT	BBAABBaLB
F	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	84.6	H1	13	H1-13-1	10	KASGYTFTNSWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	70.0	H2	10	H2-10-1	8	NIFPGNGNTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	100.0	H3	7	H3-7-*	-1	TRGLFAY	BBEBLAB
H	heavy	Mus.musculus	Mo_IGHV1S22*01	92.9	Mo_IGHV1S22*01	87.5	H4	8	H4-8-1	9	VDTSSNTA	BBAAALBB
H	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	82.4	L1	17	L1-17-*	-1	KSSQSLlinnnqKNYLA
H	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	100.0	L2	8	L2-8-1	8	YFASTRES	BLLABBBB
H	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	57.1	L3	9	L3-9-cis7-*	-1	QQHFTAPYT	BBAABBaLB
H	kappa	Mus.musculus	Mo_IGKV8-24*01	100.0	Mo_IGKV8-24*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022