PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7JO8

#CDRs = 4; #Clusters = 5.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Synthetic.construct	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-2	4	RASQSVSsSYLA	BBABBBBLLBBB
A	kappa	Synthetic.construct	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	5	YGASSRAT	BLLABBBB
A	kappa	Synthetic.construct	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	85.7	L3	9	L3-9-*	-1	QQYGSSRFT	BBAABEBBB
A	kappa	Synthetic.construct	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
B	kappa	Synthetic.construct	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	9	RASQSVSsSYLA	BBABBBBAAABB
B	kappa	Synthetic.construct	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	4	YGASSRAT	BLLABBBB
B	kappa	Synthetic.construct	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	85.7	L3	9	L3-9-*	-1	QQYGSSRFT	BBAABEBBB
B	kappa	Synthetic.construct	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022