PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7JMO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV3-53*02	98.6	Hu_IGHV3-53*02	100.0	H1	13	H1-13-1	10	AASGFTVSSNYMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*02	98.6	Hu_IGHV3-53*02	88.9	H2	9	H2-9-1	8	VIYSGGSTF	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-53*02	98.6	Hu_IGHV3-53*02	100.0	H3	12	H3-12-*	-1	ARDLERAGGMDV	BBBAEAALEBAB
H	heavy	Homo.sapiens	Hu_IGHV3-53*02	98.6	Hu_IGHV3-53*02	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L1	12	L1-12-1	7	RASQSVSsSYLA	BBABBBBAAABB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	6	YGASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	71.4	L3	8	L3-8-1	10	QQYGSLYT	BBAABEBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	98.6	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022