PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7JKT

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	53.8	H1	13	H1-13-1	10	KTSGYSFTDFFIH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	50.0	H2	10	H2-10-*	-1	WLNPIFGAVN	BBBABEABBB
H	heavy	Mus.musculus	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	50.0	H3	15	H3-15-*	-1	VRKRVYdEYDWDWAY
H	heavy	Mus.musculus	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	75.0	H4	8	H4-8-1	7	RDTSMKTA	BBAAALBB
L	kappa	Mus.musculus	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	58.3	L1	12	L1-12-*	-1	RTSQDVgSNSLA	BBABBAEAAABB
L	kappa	Mus.musculus	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	87.5	L2	8	L2-8-1	4	YGASNRAT	BLLABBBB
L	kappa	Mus.musculus	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	0.0	L3	5	L3-5-1	10	QQYEY	BBEAB
L	kappa	Mus.musculus	Hu_IGKV3-20*01	92.8	Hu_IGKV3-20*01	100.0	L4	6	L4-6-3	28	GSGTDF	EAAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022