PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7JIX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-82*01	97.3	Mo_IGHV1-82*01	92.3	H1	13	H1-13-1	13	KASGYAFSRSWMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-82*01	97.3	Mo_IGHV1-82*01	100.0	H2	10	H2-10-1	11	RIYPGDGDTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-82*01	97.3	Mo_IGHV1-82*01	100.0	H3	9	H3-9-*	-1	ARGSNSFAY	BBEAABBAB
H	heavy	Mus.musculus	Mo_IGHV1-82*01	97.3	Mo_IGHV1-82*01	100.0	H4	8	H4-8-1	8	ADKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	100.0	Mo_IGKV3-4*01	93.3	L1	15	L1-15-*	-1	KASQSVDfdgdSYMN	BBABBBBBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	100.0	Mo_IGKV3-4*01	75.0	L2	8	L2-8-1	13	YTTSNLES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	100.0	Mo_IGKV3-4*01	85.7	L3	9	L3-9-cis7-1	12	QQSSEDPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	100.0	Mo_IGKV3-4*01	100.0	L4	6	L4-6-1	16	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022