PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7JIC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-69*03	83.6	Mo_IGHV1-69*03	84.6	H1	13	H1-13-1	15	KTSGYTFTSNWMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-69*03	83.6	Mo_IGHV1-69*03	100.0	H2	10	H2-10-1	13	EIDPSDSYTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-69*03	83.6	Mo_IGHV1-69*03	0.0	H3	13	H3-13-*	-1	ARGSNPYYYAMDY	BBBBBbAABBBAB
H	heavy	Mus.musculus	Mo_IGHV1-69*03	83.6	Mo_IGHV1-69*03	87.5	H4	8	H4-8-1	11	VDKSTSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-70*01	92.8	Mo_IGKV4-70*01	70.0	L1	10	L1-10-*	-1	SASSGVNYMH	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-70*01	92.8	Mo_IGKV4-70*01	100.0	L2	8	L2-8-*	-1	YDTSKLAS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV4-70*01	92.8	Mo_IGKV4-70*01	57.1	L3	9	L3-9-*	-1	HQRGSxxYT
L	kappa	Mus.musculus	Mo_IGKV4-70*01	92.8	Mo_IGKV4-70*01	83.3	L4	6	L4-6-1	12	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022