PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7JHG

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Synthetic.construct	Hu_IGHV3-66*01	94.5	Mo_IGHV1S68*02	46.2	H1	13	H1-13-1	24	AASGFNIYYYSIH	BBBLBBAAABBBB
H	heavy	Synthetic.construct	Hu_IGHV3-66*01	94.5	Mo_IGHV1S68*02	70.0	H2	10	H2-10-1	17	SIYPYSGSTS	BBBAAALBBB
H	heavy	Synthetic.construct	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	100.0	H3	19	H3-19-*	-1	ARYypyfiSYYSKMEAMDY
H	heavy	Synthetic.construct	Hu_IGHV3-66*01	94.5	Hu_IGHV3-66*01	62.5	H4	8	H4-8-1	13	ADTSKNTA	BBAAALBB
L	kappa	Synthetic.construct	Hu_IGKV1-39*01	98.6	Mo_IGKV6-17*01	72.7	L1	11	L1-11-*	-1	RASQSVSSAVA	BBABBBBBABB
L	kappa	Synthetic.construct	Hu_IGKV1-39*01	98.6	Mo_IGKV6-17*01	62.5	L2	8	L2-8-*	-1	YSASSLYS	AALABBBB
L	kappa	Synthetic.construct	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	71.4	L3	9	L3-9-2	20	QQSSSGPIT	BBAABABBB
L	kappa	Synthetic.construct	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	83.3	L4	6	L4-6-2	22	RSGTDF	BBEABB
N	heavy	Synthetic.construct	Al_IGHV3-3*01_VHH	93.2	Al_IGHV3-3*01_VHH	76.9	H1	13	H1-13-*	-1	AASGRTISRYAMS	BBBLBBAAABBBB
N	heavy	Synthetic.construct	Al_IGHV3-3*01_VHH	93.2	Al_IGHV3-3*01_VHH	20.0	H2	10	H2-10-2	16	VARRSGDGAF	BBBAALABBB
N	heavy	Synthetic.construct	Al_IGHV3-3*01_VHH	93.2	Al_IGHV3-3*01_VHH	50.0	H3	14	H3-14-*	-1	AIDSDTFYSGSYDY	BBBABBLBABBBBB
N	heavy	Synthetic.construct	Al_IGHV3-3*01_VHH	93.2	Al_IGHV3-3*01_VHH	87.5	H4	8	H4-8-1	17	RDDAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022