PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7JGJ

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-42*01	91.8	Mo_IGHV1-42*01	92.3	H1	13	H1-13-1	21	KASGYSFTGYNMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-42*01	91.8	Mo_IGHV1-42*01	50.0	H2	10	H2-10-1	19	SIDPYTGGSN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-42*01	91.8	Mo_IGHV1-42*01	50.0	H3	12	H3-12-*	-1	ATVVGRVYAMDY	BBBBLLBABaBb
H	heavy	Mus.musculus	Mo_IGHV1-42*01	91.8	Mo_IGHV1-42*01	100.0	H4	8	H4-8-1	15	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-63*01	98.5	Mo_IGKV4-63*01	90.0	L1	10	L1-10-1	20	SASSSVSYIH	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-63*01	98.5	Mo_IGKV4-63*01	87.5	L2	8	L2-8-1	14	YATSKLAS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV4-63*01	98.5	Mo_IGKV4-63*01	87.5	L3	9	L3-9-cis7-*	-1	FQGSGYPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-63*01	98.5	Mo_IGKV4-63*01	100.0	L4	6	L4-6-1	18	GSGNSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022