PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7FJS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	5	KSSQSLlysnnqKNYLA	BBABBABBAAALBBBBB
A	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	75.0	L2	8	L2-8-1	11	HWTSTRES	BLEABBBB
A	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	85.7	L3	9	L3-9-cis7-1	8	QQYYTYPWT	BBAABBbBB
A	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	69.2	H1	13	H1-13-1	12	KTSGYRFTSYIIH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	70.0	H2	10	H2-10-1	6	AIFPENDDTS	BBBAAALBBB
C	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	0.0	H3	10	H3-10-*	-1	ARDGENVLDY	BBBBAAEBAB
C	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	75.0	H4	8	H4-8-1	7	TDTSSSTA	BBAAALBB
H	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	69.2	H1	13	H1-13-1	12	KTSGYRFTSYIIH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	70.0	H2	10	H2-10-1	6	AIFPENDDTS	BBBAAALBBB
H	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	0.0	H3	10	H3-10-*	-1	ARDGENVLDY	BBBBABEBAB
H	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	75.0	H4	8	H4-8-1	6	TDTSSSTA	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	6	KSSQSLlysnnqKNYLA	BBABBABBAAALBBBBB
L	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	75.0	L2	8	L2-8-1	9	HWTSTRES	BLEABBBB
L	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	85.7	L3	9	L3-9-cis7-1	9	QQYYTYPWT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022