PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7FJO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	69.2	H1	13	H1-13-*	-1	KTSGYRFTSYIIH	BBBLBBELBABBB
F	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	70.0	H2	10	H2-10-*	-1	AIFPENDDTS	BBBABBBALB
F	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	0.0	H3	10	H3-10-*	-1	ARDGENVLDY	BBBBABBBLA
F	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	75.0	H4	8	H4-8-1	22	TDTSSSTA	BBAAALBB
G	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	16	KSSQSLlysnnqKNYLA	BBABBABBAAALBBBBB
G	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	75.0	L2	8	L2-8-1	22	HWTSTRES	BLLABBBB
G	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	85.7	L3	9	L3-9-cis7-1	17	QQYYTYPWT	BBAABBbBB
G	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	100.0	L4	6	L4-6-2	24	GSGTDF	BBEABB
H	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	69.2	H1	13	H1-13-*	-1	KTSGYRFTSYIIH	BBBLBBELBABBB
H	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	70.0	H2	10	H2-10-*	-1	AIFPENDDTS	BBBABBBALB
H	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	0.0	H3	10	H3-10-*	-1	ARDGENVLDY	BBBBABBBLA
H	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	75.0	H4	8	H4-8-1	22	TDTSSSTA	BBAAALBB
J	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	69.2	H1	13	H1-13-*	-1	KTSGYRFTSYIIH	BBBLBBELBABBB
J	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	70.0	H2	10	H2-10-*	-1	AIFPENDDTS	BBBABBBALB
J	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	0.0	H3	10	H3-10-*	-1	ARDGENVLDY	BBBBABBBLA
J	heavy	Homo.sapiens	Mo_IGHV1S121*01	90.2	Mo_IGHV1S121*01	75.0	H4	8	H4-8-1	22	TDTSSSTA	BBAAALBB
K	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	16	KSSQSLlysnnqKNYLA	BBABBABBAAALBBBBB
K	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	75.0	L2	8	L2-8-1	22	HWTSTRES	BLLABBBB
K	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	85.7	L3	9	L3-9-cis7-1	17	QQYYTYPWT	BBAABBbBB
K	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	100.0	L4	6	L4-6-2	24	GSGTDF	BBEABB
L	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	94.1	L1	17	L1-17-1	16	KSSQSLlysnnqKNYLA	BBABBABBAAALBBBBB
L	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	75.0	L2	8	L2-8-1	22	HWTSTRES	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	85.7	L3	9	L3-9-cis7-1	17	QQYYTYPWT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV8-30*01	91.2	Mo_IGKV8-30*01	100.0	L4	6	L4-6-2	24	GSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022