PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7FCI

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S81*02	94.5	Mo_IGHV1S81*02	76.9	H1	13	H1-13-1	11	KTSGYTFTNYWMK	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S81*02	94.5	Mo_IGHV1S81*02	90.0	H2	10	H2-10-1	17	EINPSNGGTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S81*02	94.5	Mo_IGHV1S81*02	0.0	H3	15	H3-15-*	-1	TILVYDaYYVFAMDY
H	heavy	Mus.musculus	Mo_IGHV1S81*02	94.5	Mo_IGHV1S81*02	100.0	H4	8	H4-8-1	7	VDKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV4-79*01	92.8	CDRLenMismatch	-1.0	L1	10	L1-10-1	14	SASSSVNYMH	BBABBBABBB
L	kappa	Mus.musculus	Mo_IGKV4-79*01	92.8	Mo_IGKV4-79*01	62.5	L2	8	L2-8-1	19	YDTSKLAL	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV4-79*01	92.8	Mo_IGKV4-79*01	87.5	L3	9	L3-9-cis7-1	15	HQWSSYPRT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV4-79*01	92.8	Mo_IGKV4-79*01	100.0	L4	6	L4-6-1	19	GSGTSY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022