PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7FAH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	84.6	H1	13	H1-13-4	13	KASGYTFTKNGMN	BBBLBBABLBBBB
C	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	90.0	H2	10	H2-10-1	16	WINTYTGEPS	BBBAAALBBB
C	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	100.0	H3	10	H3-10-*	-1	ARMVRDAMDF	BBBAALBBAB
C	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	100.0	H4	8	H4-8-*	-1	LETSASTA	BBAABBBB
D	kappa	Mus.musculus	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	73.3	L1	15	L1-15-1	13	KASQSVDfdgyNYLN	BBABBABBLLBBBBB
D	kappa	Mus.musculus	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	100.0	L2	8	L2-8-*	-1	YAASNLES	BLaABBBB
D	kappa	Mus.musculus	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	100.0	L3	9	L3-9-cis7-1	9	QQSNEDPYT	BBAABBbBB
D	kappa	Mus.musculus	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	84.6	H1	13	H1-13-4	13	KASGYTFTKNGMN	BBBLBBABLBBBB
H	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	90.0	H2	10	H2-10-1	16	WINTYTGEPS	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	100.0	H3	10	H3-10-*	-1	ARMVRDAMDF	BBBAALBBAB
H	heavy	Mus.musculus	Mo_IGHV9-1*02	94.5	Mo_IGHV9-1*02	100.0	H4	8	H4-8-*	-1	LETSASTA	BBAABBBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	73.3	L1	15	L1-15-1	13	KASQSVDfdgyNYLN	BBABBABBLLBBBBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	100.0	L2	8	L2-8-*	-1	YAASNLES	BLaABBBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	100.0	L3	9	L3-9-cis7-1	9	QQSNEDPYT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-4*01	98.6	Mo_IGKV3-4*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022