PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7FAB

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV4-59*04	81.9	Hu_IGHV4-59*04	61.5	H1	13	H1-13-1	19	TVSGTSFDDYYWT	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*04	81.9	Hu_IGHV4-59*04	44.4	H2	9	H2-9-1	13	YVFYTGTTL	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-59*04	81.9	Hu_IGHV4-59*04	100.0	H3	11	H3-11-*	-1	ARNLIAGGIDV	BBBAEBLEBAB
H	heavy	Homo.sapiens	Hu_IGHV4-59*04	81.9	Hu_IGHV4-59*04	87.5	H4	8	H4-8-1	11	VNTSKNQF	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	91.0	Hu_IGLV1-40*01	78.6	L1	14	L1-14-3	14	TGSSSNIGAgHNVK	BBBAAAAAALBBBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	91.0	CDRLenMismatch	-1.0	L2	5	L2-5-*	-1	FHNNA
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	91.0	Hu_IGLV1-40*01	66.7	L3	9	L3-9-4	28	QSYDRSLRV	BBBBEABBB
L	lambda	Homo.sapiens	Hu_IGLV1-40*01	91.0	Hu_IGLV1-40*01	100.0	L4	6	L4-6-2	9	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022