PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7F7H

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	84.6	H1	13	H1-13-1	14	AASGLTVSSNYMT	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	88.9	H2	9	H2-9-1	8	VIYSGGSTF	BBBAALBBB
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H3	11	H3-11-*	-1	ARDLVVYGMDV	BBBBAAAEBAB
A	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	90.9	L1	11	L1-11-*	-1	RASQGISSDLA	BBABBBBLBBB
B	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	11	YAASTLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	85.7	L3	9	L3-9-*	-1	QQLNSHPLA	BBBBAABBB
B	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L4	6	L4-6-1	10	GSGTEF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	84.6	H1	13	H1-13-1	14	AASGLTVSSNYMT	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	88.9	H2	9	H2-9-1	8	VIYSGGSTF	BBBAALBBB
C	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H3	11	H3-11-*	-1	ARDLVVYGMDV	BBBBAAAEBAB
C	heavy	Homo.sapiens	Hu_IGHV3-53*01	98.6	Hu_IGHV3-53*01	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	90.9	L1	11	L1-11-*	-1	RASQGISSDLA	BBABBBAABBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L2	8	L2-8-1	11	YAASTLQS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	85.7	L3	9	L3-9-*	-1	QQLNSHPLA	BBBBAABBB
D	kappa	Homo.sapiens	Hu_IGKV1-9*01	100.0	Hu_IGKV1-9*01	100.0	L4	6	L4-6-1	9	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022