PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7F5H

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.2	Al_IGHV3S53*01_VHH	69.2	H1	13	H1-13-*	-1	AASGSDFSSSTMG	BBBLBBABLBBBE
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.2	CDRLenMismatch	-1.0	H2	8	H2-8-*	-1	ISSEGSTS
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.2	Al_IGHV3S53*01_VHH	50.0	H3	9	H3-9-*	-1	NVVDRWYDY	BBBBAABBB
C	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.2	Al_IGHV3S53*01_VHH	100.0	H4	8	H4-8-1	9	RDNAKNTV	BBAAALBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.2	Al_IGHV3S53*01_VHH	69.2	H1	13	H1-13-*	-1	AASGSDFSSSTMG	BBBLBBABLBBBE
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.2	CDRLenMismatch	-1.0	H2	8	H2-8-*	-1	ISSEGSTS
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.2	Al_IGHV3S53*01_VHH	50.0	H3	9	H3-9-*	-1	NVVDRWYDY	BBBBAABBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.2	Al_IGHV3S53*01_VHH	100.0	H4	8	H4-8-1	12	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022