PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7F5G

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	87.7	Al_IGHV3S53*01_VHH	53.8	H1	13	H1-13-*	-1	AASGSFFEFGTVG	BBBEABBBAABBB
B	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	87.7	Al_IGHV3S53*01_VHH	22.2	H2	9	H2-9-*	-1	RITGNDHRY	BBBEAABBB
B	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	87.7	Al_IGHV3S53*01_VHH	50.0	H3	11	H3-11-*	-1	NILEGQRWSNY	BBBBEABBBAB
B	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	87.7	Al_IGHV3S53*01_VHH	62.5	H4	8	H4-8-*	-1	RDNDETTV	BBAABBBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	87.7	Al_IGHV3S53*01_VHH	53.8	H1	13	H1-13-*	-1	AASGSFFEFGTVG	BBBEABBBAABBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	87.7	Al_IGHV3S53*01_VHH	22.2	H2	9	H2-9-*	-1	RITGNDHRY	BBBEAABBB
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	87.7	Al_IGHV3S53*01_VHH	50.0	H3	11	H3-11-*	-1	NILEGQRWSNY	BBBBEABBBAA
D	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	87.7	Al_IGHV3S53*01_VHH	62.5	H4	8	H4-8-*	-1	RDNDETTV	BBAABBBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022