PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7F4H

#CDRs = 8; #Clusters = 11.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
N	heavy	Synthetic.construct	Al_IGHV3S39*01	94.5	Al_IGHV3S39*01	76.9	H1	13	H1-13-*	-1	AASGFTFSNYKMN	BBBLALAAABBBB
N	heavy	Synthetic.construct	Al_IGHV3S39*01	94.5	Al_IGHV3S39*01	40.0	H2	10	H2-10-2	10	DISQSGASIS	BBBAALABBB
N	heavy	Synthetic.construct	Al_IGHV3S39*01	94.5	Al_IGHV3S39*01	0.0	H3	21	H3-21-*	-1	ARcpapftrDCFDVTSTTYAY
N	heavy	Synthetic.construct	Al_IGHV3S39*01	94.5	Al_IGHV3S39*01	100.0	H4	8	H4-8-1	11	RDNAKNTL	BBAAALBB
S	heavy	Synthetic.construct	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	84.6	H1	13	H1-13-1	13	SASGFAFSSFGMH	BBBLBBAAABBBB
S	heavy	Synthetic.construct	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	90.0	H2	10	H2-10-4	8	YISSGSGTIY	BBBBLLABBB
S	heavy	Synthetic.construct	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	50.0	H3	14	H3-14-*	-1	VRSIYYYGSSPFDF	BBBBBBBLBBBLAB
S	heavy	Synthetic.construct	Mo_IGHV5-17*02	98.6	Mo_IGHV5-17*02	87.5	H4	8	H4-8-1	8	RDDPKNTL	BBAAALBB
S	kappa	Synthetic.construct	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	100.0	L1	16	L1-16-*	-1	RSSKSLlhsngNTYLY	BBABBABBAALBALBB
S	kappa	Synthetic.construct	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	100.0	L2	8	L2-8-*	-1	YRMSNLAS	BLEABBBA
S	kappa	Synthetic.construct	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	100.0	L3	9	L3-9-cis7-1	7	MQHLEYPLT	BBAABBbBB
S	kappa	Synthetic.construct	Mo_IGKV2-137*01	94.2	Mo_IGKV2-137*01	100.0	L4	6	L4-6-*	-1	GSGTAF	EALABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022