PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7F3Q

#CDRs = 8; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	98.5	Hu_IGKV1-12*01	81.8	L1	11	L1-11-*	-1	RASQGIGNWLA	BBBBLAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	98.5	Hu_IGKV1-12*01	100.0	L2	8	L2-8-1	8	YAASSLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	98.5	Hu_IGKV1-12*01	100.0	L3	8	L3-8-*	-1	QQANSFPP	BBABLLBB
B	kappa	Homo.sapiens	Hu_IGKV1-12*01	98.5	Hu_IGKV1-12*01	100.0	L4	6	L4-6-1	14	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H1	13	H1-13-1	10	AASGFTFSSYAMS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	90.0	H2	10	H2-10-2	13	AIVGSGGSTY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H3	20	H3-20-*	-1	AKSLIYGHYdiltgaYYFDY
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	98.6	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	6	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	84.6	H1	13	H1-13-1	14	AASGFTFDESAMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	80.0	H2	10	H2-10-2	19	GISWNSGRIA	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	33.3	H3	12	H3-12-*	-1	ALTTSGWFSFDY	BBBABEAABBAB
H	heavy	Homo.sapiens	Hu_IGHV3-9*01	95.9	Hu_IGHV3-9*01	100.0	H4	8	H4-8-1	11	RDNAKNSL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	97.0	Hu_IGLV3-21*01	100.0	L1	11	L1-11-3	16	GGNNIGSKSVH	BEBLAAABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	97.0	Hu_IGLV3-21*01	100.0	L2	8	L2-8-1	14	YYDSDRPS	BLEABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	97.0	Hu_IGLV3-21*01	88.9	L3	11	L3-11-1	18	QVWDSSSDRAV	BBBBAAALBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	97.0	Hu_IGLV3-21*01	100.0	L4	6	L4-6-2	15	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022