PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 7EYC

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Hu_IGHV4-34*09	97.3	Mo_IGHV3-8*02	84.6	H1	13	H1-13-1	23	TVSGDSITSGYWN	BBBLBBAAABBBB
A	heavy	Mus.musculus	Hu_IGHV4-34*09	97.3	Mo_IGHV3-8*02	77.8	H2	9	H2-9-1	10	YIRYSGRTY	BBBAALBBB
A	heavy	Mus.musculus	Hu_IGHV4-34*09	97.3	Hu_IGHV4-34*09	50.0	H3	7	H3-7-*	-1	ASVYFTY	BBBLLAB
A	heavy	Mus.musculus	Hu_IGHV4-34*09	97.3	Hu_IGHV4-34*09	87.5	H4	8	H4-8-1	7	RDTSKNQF	BBAAALBB
B	kappa	Mus.musculus	Hu_IGKV2D-30*01	97.1	Mo_IGKV1-135*01	100.0	L1	16	L1-16-1	6	KSSQSLldsdgKTYLN	BBABBABBAALBBBBB
B	kappa	Mus.musculus	Hu_IGKV2D-30*01	97.1	Mo_IGKV1-135*01	87.5	L2	8	L2-8-1	8	SLVSKLDS	BLEABBBB
B	kappa	Mus.musculus	Hu_IGKV2D-30*01	97.1	Hu_IGKV2D-30*01	57.1	L3	9	L3-9-cis7-1	15	WQGSHFPYT	BBAABBbBB
B	kappa	Mus.musculus	Hu_IGKV2D-30*01	97.1	Hu_IGKV2D-30*01	100.0	L4	6	L4-6-1	20	GSGTDF	EBEABB
H	heavy	Mus.musculus	Hu_IGHV4-34*09	97.3	Mo_IGHV3-8*02	84.6	H1	13	H1-13-1	23	TVSGDSITSGYWN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Hu_IGHV4-34*09	97.3	Mo_IGHV3-8*02	77.8	H2	9	H2-9-1	8	YIRYSGRTY	BBBAALBBB
H	heavy	Mus.musculus	Hu_IGHV4-34*09	97.3	Hu_IGHV4-34*09	50.0	H3	7	H3-7-*	-1	ASVYFTY	BBBLLAB
H	heavy	Mus.musculus	Hu_IGHV4-34*09	97.3	Hu_IGHV4-34*09	87.5	H4	8	H4-8-1	6	RDTSKNQF	BBAAALBB
L	kappa	Mus.musculus	Hu_IGKV2D-30*01	97.1	Mo_IGKV1-135*01	100.0	L1	16	L1-16-1	7	KSSQSLldsdgKTYLN	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Hu_IGKV2D-30*01	97.1	Mo_IGKV1-135*01	87.5	L2	8	L2-8-1	8	SLVSKLDS	BLEABBBB
L	kappa	Mus.musculus	Hu_IGKV2D-30*01	97.1	Hu_IGKV2D-30*01	57.1	L3	9	L3-9-cis7-1	15	WQGSHFPYT	BBAABBbBB
L	kappa	Mus.musculus	Hu_IGKV2D-30*01	97.1	Hu_IGKV2D-30*01	100.0	L4	6	L4-6-1	15	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022